BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036F05LP1|AL430257
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1784 0.0
3x_Contig180 355 1e-97
>3x_Contig1805
Length = 19369
Score = 1784 bits (900), Expect = 0.0
Identities = 914/916 (99%), Gaps = 2/916 (0%)
Strand = Plus / Minus
Query: 1 gctaacaacaccaacaggctgtacctgtgaattgcgcatgatgttttgaatgttgacctt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5099 gctaacaacaccaacaggctgtacctg-gaattgcgcatgatgttttgaatgttgacctt 5041
Query: 61 ttgttttttgatgctattagtttgttttctataaacaaacaattaatggcggtcacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5040 ttgttttttgatgctattagtttgttttctataaacaaacaattaatggcggtcacactt 4981
Query: 121 taaatgtcattgagttttccttagtacctcctaatggtttctatcagcttgtatatatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4980 taaatgtcattgagttttccttagtacctcctaatggtttctatcagcttgtatatatac 4921
Query: 181 ataccaaattgaaattttcagtagaaataacatttcagtagcagcatatggccgataagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4920 ataccaaattgaaattttcagtagaaataacatttcagtagcagcatatggccgataagt 4861
Query: 241 gcatataatcaggaacactgctttctgtgcaccccaacttgtaatttcaggtatacgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4860 gcatataatcaggaacactgctttctgtgcaccccaacttgtaatttcaggtatacgttg 4801
Query: 301 gtaaagtacattgaagggaaggagaatgtccgcctaaaaataaaacaacaccaacaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4800 gtaaagtacattgaagggaaggagaatgtccgcctaaaaataaaacaacaccaacaataa 4741
Query: 361 tttgaaaccagtgactaatgaactgtgggaggacactaacgcaatagtctgtttaataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4740 tttgaaaccagtgactaatgaactgtgggaggacactaacgcaatagtctgtttaataac 4681
Query: 421 ttgaatccaaaaacacaaaagaaaaatgttctatgccgattgtctttgcactcaatagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4680 ttgaatccaaaaacacaaaagaaaaatgttctatgccgattgtctttgcactcaatagtc 4621
Query: 481 gaagtaacatactcagcatcaattgcgagaagtatgtaaatcaactttttgagtttttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4620 gaagtaacatactcagcatcaattgcgagaagtatgtaaatcaactttttgagtttttgg 4561
Query: 541 agactggtggagttggttattgtcaagcatgcagtaatcctccagaacctgtgttcaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4560 agactggtggagttggttattgtcaagcatgcagtaatcctccagaacctgtgttcaatg 4501
Query: 601 gcaaacaagagcctttcagctcagacacagataaaagctttgttcccttagactgacctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4500 gcaaacaagagcctttcagctcagacacagataaaagctttgttcccttagactgacctg 4441
Query: 661 ctaaacccatctttttttttaaaagagctgcataaaaggccattctaagctaaagaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4440 ctaaacccatctttttttttaaaagagctgcataaaaggccattctaagctaaagaacaa 4381
Query: 721 agctttggaataaagaaattccaaatccgacacttgggttctatccgaagccggaatttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4380 agctttggaataaagaaattccaaatccgacacttgggttctatccgaagccggaatttt 4321
Query: 781 tctttattttgttatcactgctcctaagtacgggcatttgaatgggcagagctgcatttt 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4320 tctttattttgttatcactgctcctaagtacgggcatttgaatgggcagagctgca-ttt 4262
Query: 841 ttctgcgtagatcttttcgaaatacctagatcgacagattggacatgcaatttttttcta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 ttctgcgtagatcttttcgaaatacctagatcgacagattggacatgcaatttttttcta 4202
Query: 901 tgcacgacgcacaaag 916
||||||||||||||||
Sbjct: 4201 tgcacgacgcacaaag 4186
>3x_Contig180
Length = 1260
Score = 355 bits (179), Expect = 1e-97
Identities = 212/219 (96%), Gaps = 3/219 (1%)
Strand = Plus / Plus
Query: 1 gctaacaacaccaacaggctgtacctgtgaattgcgcatgatgttttgaatgttgacctt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 82 gctaacaacaccaacaggctgtacctg-gaattgcgcatgatgttttgaatgttgacctt 140
Query: 61 ttgttttttgatgctattagtttgttttctataaacaaacaattaatggcggtcacactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttgttttttgatgctattagtttgttttctataaacaaacaattaatggcggtcacactt 200
Query: 121 taaatgtcattgagttttccttagtacctcctaatggtttctatcagcttgtatatatac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaatgtcattgagttttccttagtacctcctaatggtttctatcagcttgtatatatat 260
Query: 181 ataccaaattgaa-attttcagtagaaata-acatttca 217
|||||||||| || ||||||| || ||||| ||||||||
Sbjct: 261 ataccaaatttaacattttcattataaatacacatttca 299
Score = 280 bits (141), Expect = 5e-75
Identities = 459/565 (81%)
Strand = Plus / Plus
Query: 243 atataatcaggaacactgctttctgtgcaccccaacttgtaatttcaggtatacgttggt 302
||||||||| |||||| |||||| | ||||||||||| |||||||| ||||| || |
Sbjct: 328 atataatcattaacacttctttcttttcaccccaacttttaatttcatttatactttttt 387
Query: 303 aaagtacattgaagggaaggagaatgtccgcctaaaaataaaacaacaccaacaataatt 362
||| |||||| || || | ||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 388 aaattacatttaatttaattataatttcctcctaataataaaacaacaccaacaataatt 447
Query: 363 tgaaaccagtgactaatgaactgtgggaggacactaacgcaatagtctgtttaataactt 422
| |||||| | |||||| |||| | | |||||||| ||||| ||| |||||||||||
Sbjct: 448 ttaaaccatttactaattaacttttttattacactaactcaatattctttttaataactt 507
Query: 423 gaatccaaaaacacaaaagaaaaatgttctatgccgattgtctttgcactcaatagtcga 482
||||||||||||||||| |||||| |||||| || ||| ||||| ||||||||| || |
Sbjct: 508 taatccaaaaacacaaaataaaaattttctattcctattttcttttcactcaatattcta 567
Query: 483 agtaacatactcagcatcaattgcgagaagtatgtaaatcaactttttgagtttttggag 542
| ||||||||||| |||||||| | | || ||| |||||||||||||| | ||||| |
Sbjct: 568 attaacatactcatcatcaatttctataattatttaaatcaacttttttattttttttat 627
Query: 543 actggtggagttggttattgtcaagcatgcagtaatcctccagaacctgtgttcaatggc 602
||| | | || ||||| |||| ||| || |||||||||| ||||| | |||||| |
Sbjct: 628 acttttttatttttttattttcaatcattcattaatcctccataaccttttttcaatttc 687
Query: 603 aaacaagagcctttcagctcagacacagataaaagctttgttcccttagactgacctgct 662
|||||| | ||||||| |||| ||||| |||| | |||| |||||||| ||| |||| ||
Sbjct: 688 aaacaatatcctttcatctcatacacatataatatcttttttcccttatacttaccttct 747
Query: 663 aaacccatctttttttttaaaagagctgcataaaaggccattctaagctaaagaacaaag 722
|||||||||||||||||||| | | || ||||| | ||||||||| ||||| ||||||
Sbjct: 748 aaacccatctttttttttaatatatcttcataatattccattctaatctaaataacaaat 807
Query: 723 ctttggaataaagaaattccaaatccgacacttgggttctatccgaagccggaatttttc 782
|||| |||||| ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 808 ctttttaataaataaattccaaatcctacactttttttctatcctaatccttaatttttc 867
Query: 783 tttattttgttatcactgctcctaa 807
|||||||| |||||||| |||||||
Sbjct: 868 tttatttttttatcacttctcctaa 892
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9253
Number of Sequences: 1807
Number of extensions: 9253
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 2
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)